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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908746.1_cds_XP_016458934.1_52513
CDS Infomation

[gene=LOC107782566] [db_xref=GeneID:107782566] [protein=probable GABA transporter 2] [protein_id=XP_016458934.1] [location=join(96367..96454,97749..97979,99528..99625,100652..100838,101264..101394,101537..101773,102232..102621)] [gbkey=CDS]
Sequence

ATGGCGCCGAAGCCTCTCCGCAATGACCCTTTTCCTGAAATTCGCCGTGCAAATGATGCT
GGTGCTGCTTTTGTTTTAGAATCCAAAGGGGAATGGTGGCATGCAGGATTTCATTTGACG
ACGGCGATAGTAGGTCCAACGGTACTGACATTGCCGTATGCATTCAGAGGGCTAGGATGG
GGATTGGGTTTCTTTTGTTTAACTGTGATGGGGTTGGTCACTTTTTACTCTTACTATCTC
ATGTCATTGGTTCTTGAACACTGTGAAAAGTCCGGTCGCCGCCATATCCGATTCAGAGAA
CTTGCCGCTGATGTCTTAGGCTCTGGATGGATGTTTTATTTTGTGGTACTCATTCAGACA
GCAGTCAACACTGGCATTAGCATAGGAGCAATCCTGCTTGCCGGAGAATGCATTCAGATC
ATGTACTCCGAACTTTCACCACACGGGCCACTGAAATTGTATCACTTCATTGCAATGGTT
ACAGTAGTAATGATATTTCTCTCTCAATTTCCATCCTTCCACTCCCTGAGGCACATCAAC
TTGGTGTCATTGTTTCTAAGCTTGGGCTACACTTTTCTAGTTGTTGGCGCTTGTATTAAT
GCCGGTAAATCAAAAAATGCACCTCCGAGAGATTACTCCTTAGAAGCCTCACAACTATCA
CGGGTATTTAGTGCTTTCACTTCTCTCTCCATCATTGCAGCCATTTTTGGGAATGGAATA
CTACCAGAAATACAGGCAACTCTCGCTCCGCCAGCAACAGGAAAGATGTTGAAAGGACTT
ATGTTATGCTATTCTGTAATTTTGGTCACTTTCTACTCTGCTTCTGTTTCCGGATATTGG
GTATTTGGAAACAAAGCCAATTCAAACATTCTCAAGAGTTTAATGCCAGATGAAGGACCT
TCCTTGGCACCAACATGGGTATTAGGTCTTGCAGTCGTCTTTATTCTTCTTCAGCTCTTT
GCCATTGGTTTGGTATATTCTCAAGTTGCTTATGAAATCATGGAAAAGAAGTCGGCAGAT
GCAAACAAGGCTGTCTTCTCTCCTCGAAACCTAATCCCAAGGATAATCCTCAGAACGCTG
TACATGGCCCTTTGCGGATTCTTTGCAGCTATGTTGCCATTCTTTGGTGACATTAACGGC
GTGGTAGGTGCCATTGGTTTTATACCTCTTGATTTTGTTCTTCCAATGCTACTTTACAAC
ATGACTTTCAAACCAAAGAAGTCATCTGTTACCTTTTGGATAAATACTTCTATAATGGTT
GTGTTCTCTGGTGCTGGACTTCTGGGATCCTTTTCTTCTATAAGGAAATTGGTTTTAGAT
GCCAATAAATTTAAGCTTTTTATTAGTGACATTGTTGATTAA

Peptide Sequence

PEP ID

XP_016458934.1
PEP Infomation

PREDICTED: probable GABA transporter 2 [Nicotiana tabacum]
Sequence

MAPKPLRNDPFPEIRRANDAGAAFVLESKGEWWHAGFHLTTAIVGPTVLTLPYAFRGLGW
GLGFFCLTVMGLVTFYSYYLMSLVLEHCEKSGRRHIRFRELAADVLGSGWMFYFVVLIQT
AVNTGISIGAILLAGECIQIMYSELSPHGPLKLYHFIAMVTVVMIFLSQFPSFHSLRHIN
LVSLFLSLGYTFLVVGACINAGKSKNAPPRDYSLEASQLSRVFSAFTSLSIIAAIFGNGI
LPEIQATLAPPATGKMLKGLMLCYSVILVTFYSASVSGYWVFGNKANSNILKSLMPDEGP
SLAPTWVLGLAVVFILLQLFAIGLVYSQVAYEIMEKKSADANKAVFSPRNLIPRIILRTL
YMALCGFFAAMLPFFGDINGVVGAIGFIPLDFVLPMLLYNMTFKPKKSSVTFWINTSIMV
VFSGAGLLGSFSSIRKLVLDANKFKLFISDIVD

Transcript Sequence

Gene sequence data has not been registered.